Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSUN3NOP2/Sun RNA methyltransferase 3. (243 aa)    
Predicted Functional Partners:
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.901
BRIX1
Biogenesis of ribosomes BRX1.
   
 0.895
PUM3
Pumilio RNA binding family member 3.
   
  0.889
ENSSARP00000005045
annotation not available
  
 0.881
SAMD8
Sterile alpha motif domain containing 8.
      
 0.879
ENSSARP00000003091
annotation not available
   
 0.874
ENSSARP00000001075
annotation not available
  
 0.872
ENSSARP00000001124
annotation not available
   
 0.871
NIP7
Nucleolar pre-rRNA processing protein NIP7.
  
 0.866
NOC3L
NOC3 like DNA replication regulator.
   
 0.821
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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