Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBE2HUbiquitin conjugating enzyme E2 H. (165 aa)    
Predicted Functional Partners:
WDR26
WD repeat domain 26.
   
 0.990
RMND5A
Required for meiotic nuclear division 5 homolog A.
   
 0.985
ENSSARP00000004100
annotation not available
   
 0.980
UBA3
Ubiquitin like modifier activating enzyme 3.
    
 0.971
RANBP10
RAN binding protein 10.
   
 0.970
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.963
ARMC8
Armadillo repeat containing 8.
   
 
 0.963
UBA7
Ubiquitin like modifier activating enzyme 7.
    
 0.962
UBA1
Ubiquitin like modifier activating enzyme 1.
    
 0.962
ENSSARP00000009445
annotation not available
    
 
 0.956
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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