Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001499annotation not available (331 aa)    
Predicted Functional Partners:
NELFA
Negative elongation factor complex member A.
    
 0.998
NELFE
Negative elongation factor complex member E.
    
 0.998
ENSSARP00000000943
annotation not available
    
 0.968
ENSSARP00000001197
annotation not available
  
 0.962
ENSSARP00000003053
annotation not available
  
 0.962
C1GALT1
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
    
 0.939
POLR2I
RNA polymerase II subunit I.
    
  0.936
POLR2D
RNA polymerase II subunit D.
    
  0.918
ENSSARP00000001402
annotation not available
    
  0.915
POLR2L
RNA polymerase II subunit L.
    
  0.915
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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