Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPM1JProtein phosphatase, Mg2+/Mn2+ dependent 1J. (503 aa)    
Predicted Functional Partners:
ENSSARP00000007708
annotation not available
   
 
 0.786
ENSSARP00000001975
annotation not available
    
 
 0.704
ENSSARP00000006276
annotation not available
    
 
 0.685
ACBD3
acyl-CoA binding domain containing 3.
    
 
 0.672
RILPL2
Rab interacting lysosomal protein like 2.
      
 0.609
ENSSARP00000002471
annotation not available
      
 0.608
ENSSARP00000011446
annotation not available
      
 0.588
ENSSARP00000002587
annotation not available
      
 0.577
SULT1C2
Sulfotransferase family 1C member 2.
      
 0.565
ENSSARP00000005545
annotation not available
      
 0.561
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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