STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1JProtein phosphatase, Mg2+/Mn2+ dependent 1J. (503 aa)    
Predicted Functional Partners:
ENSSARP00000002587
annotation not available
      
 0.689
DDB2
Damage specific DNA binding protein 2.
      
 0.663
RAB8B
RAB8B, member RAS oncogene family.
    
 
 0.604
ENSSARP00000002471
annotation not available
      
 0.573
ENSSARP00000001975
annotation not available
    
 
 0.565
PPM1F
Protein phosphatase, Mg2+/Mn2+ dependent 1F.
      
 0.539
PPTC7
PTC7 protein phosphatase homolog.
      
 0.536
ENSSARP00000010138
annotation not available
      
 0.534
HTR7
5-hydroxytryptamine receptor 7.
      
 0.501
ENSSARP00000003152
annotation not available
      
 0.501
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.