CDC42BPA protein (Sorex araneus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

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[Homology]

Score

CDC42BPA

CDC42 binding protein kinase alpha. (1675 aa)

Predicted Functional Partners:

ENSSARP00000010398

0.933

ENSSARP00000006823

0.840

STK38

0.838

ENSSARP00000004069

0.802

ENSSARP00000004682

0.796

ENSSARP00000006116

0.796

ENSSARP00000006588

0.796

ENSSARP00000010365

0.796

EFCAB1

0.793

ARMC4

0.793

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARMC4	CDC42BPA	ENSSARP00000011238	ENSSARP00000001507	Armadillo repeat containing 4.	CDC42 binding protein kinase alpha.	0.793
ARMC4	EFCAB1	ENSSARP00000011238	ENSSARP00000000200	Armadillo repeat containing 4.	EF-hand calcium binding domain 1.	0.993
ARMC4	ENSSARP00000004069	ENSSARP00000011238	ENSSARP00000004069	Armadillo repeat containing 4.	annotation not available	0.992
ARMC4	ENSSARP00000006823	ENSSARP00000011238	ENSSARP00000006823	Armadillo repeat containing 4.	annotation not available	0.967
ARMC4	ENSSARP00000010398	ENSSARP00000011238	ENSSARP00000010398	Armadillo repeat containing 4.	annotation not available	0.793
CDC42BPA	ARMC4	ENSSARP00000001507	ENSSARP00000011238	CDC42 binding protein kinase alpha.	Armadillo repeat containing 4.	0.793
CDC42BPA	EFCAB1	ENSSARP00000001507	ENSSARP00000000200	CDC42 binding protein kinase alpha.	EF-hand calcium binding domain 1.	0.793
CDC42BPA	ENSSARP00000004069	ENSSARP00000001507	ENSSARP00000004069	CDC42 binding protein kinase alpha.	annotation not available	0.802
CDC42BPA	ENSSARP00000004682	ENSSARP00000001507	ENSSARP00000004682	CDC42 binding protein kinase alpha.	annotation not available	0.796
CDC42BPA	ENSSARP00000006116	ENSSARP00000001507	ENSSARP00000006116	CDC42 binding protein kinase alpha.	annotation not available	0.796
CDC42BPA	ENSSARP00000006588	ENSSARP00000001507	ENSSARP00000006588	CDC42 binding protein kinase alpha.	annotation not available	0.796
CDC42BPA	ENSSARP00000006823	ENSSARP00000001507	ENSSARP00000006823	CDC42 binding protein kinase alpha.	annotation not available	0.840
CDC42BPA	ENSSARP00000010365	ENSSARP00000001507	ENSSARP00000010365	CDC42 binding protein kinase alpha.	annotation not available	0.796
CDC42BPA	ENSSARP00000010398	ENSSARP00000001507	ENSSARP00000010398	CDC42 binding protein kinase alpha.	annotation not available	0.933
CDC42BPA	STK38	ENSSARP00000001507	ENSSARP00000009647	CDC42 binding protein kinase alpha.	Serine/threonine kinase 38.	0.838
EFCAB1	ARMC4	ENSSARP00000000200	ENSSARP00000011238	EF-hand calcium binding domain 1.	Armadillo repeat containing 4.	0.993
EFCAB1	CDC42BPA	ENSSARP00000000200	ENSSARP00000001507	EF-hand calcium binding domain 1.	CDC42 binding protein kinase alpha.	0.793
EFCAB1	ENSSARP00000004069	ENSSARP00000000200	ENSSARP00000004069	EF-hand calcium binding domain 1.	annotation not available	0.994
EFCAB1	ENSSARP00000006823	ENSSARP00000000200	ENSSARP00000006823	EF-hand calcium binding domain 1.	annotation not available	0.488
EFCAB1	ENSSARP00000010398	ENSSARP00000000200	ENSSARP00000010398	EF-hand calcium binding domain 1.	annotation not available	0.793