STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001514annotation not available (1198 aa)    
Predicted Functional Partners:
ENSSARP00000008540
annotation not available
   
 0.983
TGFB2
Transforming growth factor beta 2.
    
 0.886
TGFB3
Transforming growth factor beta 3.
   
 0.833
ENSSARP00000008273
annotation not available
    
 0.771
THBS1
Thrombospondin 1.
     
 0.761
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.754
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.715
ENSSARP00000012239
annotation not available
    
  0.701
ITGB8
Integrin subunit beta 8.
    
 0.693
ARID4B
AT-rich interaction domain 4B.
    
 0.681
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.