STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM3Zinc finger SWIM-type containing 3. (698 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
   
 0.959
ARID4B
AT-rich interaction domain 4B.
   
 0.959
MEAF6
MYST/Esa1 associated factor 6.
    
 0.898
TRRAP
Transformation/transcription domain associated protein.
   
 0.887
ENSSARP00000003022
annotation not available
    
 0.766
SIN3A
SIN3 transcription regulator family member A.
   
 0.749
ENSSARP00000013068
annotation not available
   
 0.749
EPC2
Enhancer of polycomb homolog 2.
    
 0.745
KAT6A
Lysine acetyltransferase 6A.
    
 0.745
ENSSARP00000007754
annotation not available
    
 0.745
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.