Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001533annotation not available (179 aa)    
Predicted Functional Partners:
ENSSARP00000002382
annotation not available
    
 
 0.824
SEZ6L2
Seizure related 6 homolog like 2.
   
 
 0.704
PPP4C
Protein phosphatase 4 catalytic subunit.
    
 
 0.676
INO80E
INO80 complex subunit E.
    
 
 0.657
SPHK2
Sphingosine kinase 2.
      
 0.651
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
      
 0.628
EPB41L4A
Erythrocyte membrane protein band 4.1 like 4A.
      
 0.621
SPAG17
Sperm associated antigen 17.
    
 
 0.620
ENSSARP00000005151
annotation not available
   
  
 0.619
ENSSARP00000000232
annotation not available
    
 
 0.615
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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