ENSSARP00000001536 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSARP00000001536

annotation not available (305 aa)

Predicted Functional Partners:

ENSSARP00000008768

0.834

MYSM1

0.809

MUC15

0.788

ENSSARP00000008680

0.754

TMPRSS15

0.742

HGF

0.726

ARID4A

0.701

ARID4B

0.701

ENSSARP00000005377

0.679

GRB2

0.663

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ARID4B	ENSSARP00000006346	ENSSARP00000010804	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.870
ARID4A	ENSSARP00000001536	ENSSARP00000006346	ENSSARP00000001536	AT-rich interaction domain 4A.	annotation not available	0.701
ARID4A	ENSSARP00000008680	ENSSARP00000006346	ENSSARP00000008680	AT-rich interaction domain 4A.	annotation not available	0.701
ARID4A	ENSSARP00000008768	ENSSARP00000006346	ENSSARP00000008768	AT-rich interaction domain 4A.	annotation not available	0.701
ARID4A	MYSM1	ENSSARP00000006346	ENSSARP00000002751	AT-rich interaction domain 4A.	Myb like, SWIRM and MPN domains 1.	0.850
ARID4B	ARID4A	ENSSARP00000010804	ENSSARP00000006346	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.870
ARID4B	ENSSARP00000001536	ENSSARP00000010804	ENSSARP00000001536	AT-rich interaction domain 4B.	annotation not available	0.701
ARID4B	ENSSARP00000008680	ENSSARP00000010804	ENSSARP00000008680	AT-rich interaction domain 4B.	annotation not available	0.703
ARID4B	ENSSARP00000008768	ENSSARP00000010804	ENSSARP00000008768	AT-rich interaction domain 4B.	annotation not available	0.703
ARID4B	MYSM1	ENSSARP00000010804	ENSSARP00000002751	AT-rich interaction domain 4B.	Myb like, SWIRM and MPN domains 1.	0.856
ENSSARP00000001536	ARID4A	ENSSARP00000001536	ENSSARP00000006346	annotation not available	AT-rich interaction domain 4A.	0.701
ENSSARP00000001536	ARID4B	ENSSARP00000001536	ENSSARP00000010804	annotation not available	AT-rich interaction domain 4B.	0.701
ENSSARP00000001536	ENSSARP00000005377	ENSSARP00000001536	ENSSARP00000005377	annotation not available	annotation not available	0.679
ENSSARP00000001536	ENSSARP00000008680	ENSSARP00000001536	ENSSARP00000008680	annotation not available	annotation not available	0.754
ENSSARP00000001536	ENSSARP00000008768	ENSSARP00000001536	ENSSARP00000008768	annotation not available	annotation not available	0.834
ENSSARP00000001536	GRB2	ENSSARP00000001536	ENSSARP00000010403	annotation not available	Growth factor receptor bound protein 2.	0.663
ENSSARP00000001536	HGF	ENSSARP00000001536	ENSSARP00000005494	annotation not available	Hepatocyte growth factor.	0.726
ENSSARP00000001536	MUC15	ENSSARP00000001536	ENSSARP00000005645	annotation not available	Mucin 15, cell surface associated.	0.788
ENSSARP00000001536	MYSM1	ENSSARP00000001536	ENSSARP00000002751	annotation not available	Myb like, SWIRM and MPN domains 1.	0.809
ENSSARP00000001536	TMPRSS15	ENSSARP00000001536	ENSSARP00000001863	annotation not available	Transmembrane serine protease 15.	0.742