ENSSARP00000001540 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSARP00000001540

annotation not available (685 aa)

Predicted Functional Partners:

ZNF274

0.889

EZH1

0.728

PHC2

0.706

ENSSARP00000010158

0.637

TRIM37

0.625

ENSSARP00000003982

0.615

ENSSARP00000005375

0.615

ENSSARP00000003543

0.614

MYSM1

0.611

ENSSARP00000006643

0.608

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001540	ENSSARP00000003543	ENSSARP00000001540	ENSSARP00000003543	annotation not available	annotation not available	0.614
ENSSARP00000001540	ENSSARP00000003982	ENSSARP00000001540	ENSSARP00000003982	annotation not available	annotation not available	0.615
ENSSARP00000001540	ENSSARP00000005375	ENSSARP00000001540	ENSSARP00000005375	annotation not available	annotation not available	0.615
ENSSARP00000001540	ENSSARP00000006643	ENSSARP00000001540	ENSSARP00000006643	annotation not available	annotation not available	0.608
ENSSARP00000001540	ENSSARP00000010158	ENSSARP00000001540	ENSSARP00000010158	annotation not available	annotation not available	0.637
ENSSARP00000001540	EZH1	ENSSARP00000001540	ENSSARP00000008932	annotation not available	Enhancer of zeste 1 polycomb repressive complex 2 subunit.	0.728
ENSSARP00000001540	MYSM1	ENSSARP00000001540	ENSSARP00000002751	annotation not available	Myb like, SWIRM and MPN domains 1.	0.611
ENSSARP00000001540	PHC2	ENSSARP00000001540	ENSSARP00000003632	annotation not available	Polyhomeotic homolog 2.	0.706
ENSSARP00000001540	TRIM37	ENSSARP00000001540	ENSSARP00000010037	annotation not available	Tripartite motif containing 37.	0.625
ENSSARP00000001540	ZNF274	ENSSARP00000001540	ENSSARP00000001301	annotation not available	Zinc finger protein 274.	0.889
ENSSARP00000003543	ENSSARP00000001540	ENSSARP00000003543	ENSSARP00000001540	annotation not available	annotation not available	0.614
ENSSARP00000003543	ENSSARP00000003982	ENSSARP00000003543	ENSSARP00000003982	annotation not available	annotation not available	0.997
ENSSARP00000003543	ENSSARP00000005375	ENSSARP00000003543	ENSSARP00000005375	annotation not available	annotation not available	0.996
ENSSARP00000003543	ENSSARP00000006643	ENSSARP00000003543	ENSSARP00000006643	annotation not available	annotation not available	0.997
ENSSARP00000003543	ENSSARP00000010158	ENSSARP00000003543	ENSSARP00000010158	annotation not available	annotation not available	0.964
ENSSARP00000003543	EZH1	ENSSARP00000003543	ENSSARP00000008932	annotation not available	Enhancer of zeste 1 polycomb repressive complex 2 subunit.	0.964
ENSSARP00000003543	MYSM1	ENSSARP00000003543	ENSSARP00000002751	annotation not available	Myb like, SWIRM and MPN domains 1.	0.676
ENSSARP00000003543	PHC2	ENSSARP00000003543	ENSSARP00000003632	annotation not available	Polyhomeotic homolog 2.	0.996
ENSSARP00000003543	TRIM37	ENSSARP00000003543	ENSSARP00000010037	annotation not available	Tripartite motif containing 37.	0.927
ENSSARP00000003543	ZNF274	ENSSARP00000003543	ENSSARP00000001301	annotation not available	Zinc finger protein 274.	0.617