Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC32A1Solute carrier family 32 member 1. (461 aa)    
Predicted Functional Partners:
SLC17A7
Solute carrier family 17 member 7.
   
 
 0.974
SYT1
Synaptotagmin 1.
   
 
 0.951
ENSSARP00000000628
annotation not available
   
 
 0.918
GAD1
Glutamate decarboxylase 1.
   
 
 0.910
SLC17A6
Solute carrier family 17 member 6.
   
  
 0.883
SNAP25
Synaptosome associated protein 25.
   
 
 0.874
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.859
SLC1A2
Solute carrier family 1 member 2.
   
 
 0.785
SLC6A5
Solute carrier family 6 member 5.
   
  
 0.770
GADL1
Glutamate decarboxylase like 1.
   
 
 0.757
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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