Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001551annotation not available (348 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 0.995
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 
 0.951
PLAA
Phospholipase A2 activating protein.
    
 
 0.950
NSFL1C
NSFL1 cofactor.
    
 
 0.937
ENSSARP00000008524
annotation not available
    
 
 0.930
UBXN6
UBX domain protein 6.
    
 
 0.929
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.929
ENSSARP00000009611
annotation not available
   
 0.929
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 
 0.911
ENSSARP00000004100
annotation not available
    
 
 0.896
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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