STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001551annotation not available (348 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 0.994
PLAA
Phospholipase A2 activating protein.
    
 
 0.969
NSFL1C
NSFL1 cofactor.
   
 
 0.966
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 
 0.964
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.958
ENSSARP00000009611
annotation not available
   
 0.958
ENSSARP00000008524
annotation not available
    
 
 0.939
ENSSARP00000009719
annotation not available
    
 
 0.934
ENSSARP00000004100
annotation not available
   
 
 0.925
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.918
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.