ENSSARP00000001561 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSSARP00000001561

annotation not available (102 aa)

Predicted Functional Partners:

FAU

0.998

RPS16

0.995

RPS8

0.995

RPS29

0.995

RPS15

0.995

ENSSARP00000006343

0.995

RPS23

0.995

RPS5

0.994

ENSSARP00000004100

0.994

ENSSARP00000005839

0.994

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001561	ENSSARP00000004100	ENSSARP00000001561	ENSSARP00000004100	annotation not available	annotation not available	0.994
ENSSARP00000001561	ENSSARP00000005839	ENSSARP00000001561	ENSSARP00000005839	annotation not available	annotation not available	0.994
ENSSARP00000001561	ENSSARP00000006343	ENSSARP00000001561	ENSSARP00000006343	annotation not available	annotation not available	0.995
ENSSARP00000001561	FAU	ENSSARP00000001561	ENSSARP00000010462	annotation not available	FAU ubiquitin like and ribosomal protein S30 fusion.	0.998
ENSSARP00000001561	RPS15	ENSSARP00000001561	ENSSARP00000004704	annotation not available	Ribosomal protein S15.	0.995
ENSSARP00000001561	RPS16	ENSSARP00000001561	ENSSARP00000000789	annotation not available	Ribosomal protein S16.	0.995
ENSSARP00000001561	RPS23	ENSSARP00000001561	ENSSARP00000008044	annotation not available	Ribosomal protein S23.	0.995
ENSSARP00000001561	RPS29	ENSSARP00000001561	ENSSARP00000001914	annotation not available	Ribosomal protein S29.	0.995
ENSSARP00000001561	RPS5	ENSSARP00000001561	ENSSARP00000001366	annotation not available	Ribosomal protein S5.	0.994
ENSSARP00000001561	RPS8	ENSSARP00000001561	ENSSARP00000000823	annotation not available	Ribosomal protein S8.	0.995
ENSSARP00000004100	ENSSARP00000001561	ENSSARP00000004100	ENSSARP00000001561	annotation not available	annotation not available	0.994
ENSSARP00000004100	ENSSARP00000005839	ENSSARP00000004100	ENSSARP00000005839	annotation not available	annotation not available	0.999
ENSSARP00000004100	ENSSARP00000006343	ENSSARP00000004100	ENSSARP00000006343	annotation not available	annotation not available	0.999
ENSSARP00000004100	FAU	ENSSARP00000004100	ENSSARP00000010462	annotation not available	FAU ubiquitin like and ribosomal protein S30 fusion.	0.999
ENSSARP00000004100	RPS15	ENSSARP00000004100	ENSSARP00000004704	annotation not available	Ribosomal protein S15.	0.999
ENSSARP00000004100	RPS16	ENSSARP00000004100	ENSSARP00000000789	annotation not available	Ribosomal protein S16.	0.999
ENSSARP00000004100	RPS23	ENSSARP00000004100	ENSSARP00000008044	annotation not available	Ribosomal protein S23.	0.999
ENSSARP00000004100	RPS29	ENSSARP00000004100	ENSSARP00000001914	annotation not available	Ribosomal protein S29.	0.999
ENSSARP00000004100	RPS5	ENSSARP00000004100	ENSSARP00000001366	annotation not available	Ribosomal protein S5.	0.999
ENSSARP00000004100	RPS8	ENSSARP00000004100	ENSSARP00000000823	annotation not available	Ribosomal protein S8.	0.999