STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPP3Membrane palmitoylated protein 3. (560 aa)    
Predicted Functional Partners:
LIN7C
Lin-7 homolog C, crumbs cell polarity complex component.
    
 0.960
LIN7B
Lin-7 homolog B, crumbs cell polarity complex component.
    
 0.960
PARD6G
Par-6 family cell polarity regulator gamma.
   
 0.852
PARD6A
Par-6 family cell polarity regulator alpha.
   
 0.852
EOGT
EGF domain specific O-linked N-acetylglucosamine transferase.
   
 
 0.797
UCHL5
Ubiquitin C-terminal hydrolase L5.
    
 
 0.772
DLG2
Discs large MAGUK scaffold protein 2.
   
 0.753
DLG3
Discs large MAGUK scaffold protein 3.
   
 0.753
DLG1
Discs large MAGUK scaffold protein 1.
   
 0.753
SNAP25
Synaptosome associated protein 25.
   
 
 0.739
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.