ENSSARP00000001568 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

ENSSARP00000001568

annotation not available (99 aa)

Predicted Functional Partners:

ENSSARP00000010204

0.970

ENSSARP00000011952

0.970

PRC1

0.939

ENSSARP00000002907

0.862

ZCWPW2

0.862

KIF11

0.862

NDC80

0.809

ENSSARP00000007741

0.773

SMC2

0.755

ENSSARP00000003249

0.745

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001568	ENSSARP00000002907	ENSSARP00000001568	ENSSARP00000002907	annotation not available	annotation not available	0.862
ENSSARP00000001568	ENSSARP00000003249	ENSSARP00000001568	ENSSARP00000003249	annotation not available	annotation not available	0.745
ENSSARP00000001568	ENSSARP00000007741	ENSSARP00000001568	ENSSARP00000007741	annotation not available	annotation not available	0.773
ENSSARP00000001568	ENSSARP00000010204	ENSSARP00000001568	ENSSARP00000010204	annotation not available	annotation not available	0.970
ENSSARP00000001568	ENSSARP00000011952	ENSSARP00000001568	ENSSARP00000011952	annotation not available	annotation not available	0.970
ENSSARP00000001568	KIF11	ENSSARP00000001568	ENSSARP00000007405	annotation not available	Kinesin family member 11.	0.862
ENSSARP00000001568	NDC80	ENSSARP00000001568	ENSSARP00000008883	annotation not available	NDC80 kinetochore complex component.	0.809
ENSSARP00000001568	PRC1	ENSSARP00000001568	ENSSARP00000000138	annotation not available	Protein regulator of cytokinesis 1.	0.939
ENSSARP00000001568	SMC2	ENSSARP00000001568	ENSSARP00000006092	annotation not available	Structural maintenance of chromosomes 2.	0.755
ENSSARP00000001568	ZCWPW2	ENSSARP00000001568	ENSSARP00000005629	annotation not available	Zinc finger CW-type and PWWP domain containing 2.	0.862
ENSSARP00000002907	ENSSARP00000001568	ENSSARP00000002907	ENSSARP00000001568	annotation not available	annotation not available	0.862
ENSSARP00000002907	ENSSARP00000003249	ENSSARP00000002907	ENSSARP00000003249	annotation not available	annotation not available	0.841
ENSSARP00000002907	ENSSARP00000007741	ENSSARP00000002907	ENSSARP00000007741	annotation not available	annotation not available	0.859
ENSSARP00000002907	ENSSARP00000010204	ENSSARP00000002907	ENSSARP00000010204	annotation not available	annotation not available	0.756
ENSSARP00000002907	ENSSARP00000011952	ENSSARP00000002907	ENSSARP00000011952	annotation not available	annotation not available	0.756
ENSSARP00000002907	NDC80	ENSSARP00000002907	ENSSARP00000008883	annotation not available	NDC80 kinetochore complex component.	0.886
ENSSARP00000002907	PRC1	ENSSARP00000002907	ENSSARP00000000138	annotation not available	Protein regulator of cytokinesis 1.	0.941
ENSSARP00000002907	SMC2	ENSSARP00000002907	ENSSARP00000006092	annotation not available	Structural maintenance of chromosomes 2.	0.837
ENSSARP00000003249	ENSSARP00000001568	ENSSARP00000003249	ENSSARP00000001568	annotation not available	annotation not available	0.745
ENSSARP00000003249	ENSSARP00000002907	ENSSARP00000003249	ENSSARP00000002907	annotation not available	annotation not available	0.841