Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPRHeterogeneous nuclear ribonucleoprotein R. (636 aa)    
Predicted Functional Partners:
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
   0.997
DHX9
DExH-box helicase 9.
   
 0.993
ENSSARP00000002530
annotation not available
   
 0.992
ENSSARP00000007231
annotation not available
   
 0.990
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.988
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.987
ENSSARP00000003341
annotation not available
   
 0.986
ILF3
Interleukin enhancer binding factor 3.
   
 
 0.984
ENSSARP00000010828
annotation not available
   
 
 0.983
ENSSARP00000000175
annotation not available
   
 0.981
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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