Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC35D3Solute carrier family 35 member D3. (325 aa)    
Predicted Functional Partners:
TMEM230
Transmembrane protein 230.
      
 0.775
SLC30A8
Solute carrier family 30 member 8.
   
  
 0.761
ENSSARP00000004418
annotation not available
   
  
 0.747
LYPLAL1
Lysophospholipase like 1.
      
 0.671
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 
 0.646
SLC35F1
Solute carrier family 35 member F1.
   
  
 0.640
ENSSARP00000012654
annotation not available
      
 0.639
ENSSARP00000000649
annotation not available
   
  
 0.627
SLC35A5
Solute carrier family 35 member A5.
   
  
 0.627
ENSSARP00000005525
annotation not available
      
 0.621
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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