STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001577annotation not available (556 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.611
SNX20
Sorting nexin 20.
      
 0.610
ENSSARP00000001458
annotation not available
    
  0.583
ENSSARP00000010474
annotation not available
    
  0.583
TRIM24
Tripartite motif containing 24.
    
  0.583
ENSSARP00000006823
annotation not available
    
 0.567
KDM2A
Lysine demethylase 2A.
    
 0.521
ENSSARP00000007374
annotation not available
    
 0.521
ARID4A
AT-rich interaction domain 4A.
    
  0.471
ARID4B
AT-rich interaction domain 4B.
    
  0.471
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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