STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001580annotation not available (241 aa)    
Predicted Functional Partners:
PDK3
Pyruvate dehydrogenase kinase 3.
   
   0.948
ENSSARP00000005830
annotation not available
   
 0.782
TCEANC2
Transcription elongation factor A N-terminal and central domain containing 2.
      
 0.738
PNP
Purine nucleoside phosphorylase.
    
 0.716
ENSSARP00000011186
annotation not available
  
 
  0.700
PRKAG1
Protein kinase AMP-activated non-catalytic subunit gamma 1.
  
 
  0.700
ENSSARP00000009866
annotation not available
    
 0.692
ENSSARP00000006929
annotation not available
      
 0.664
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
  
  
 0.662
PDK4
Pyruvate dehydrogenase kinase 4.
   
   0.659
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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