Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001586annotation not available (607 aa)    
Predicted Functional Partners:
RS1
Retinoschisin 1.
      
 0.642
CDHR1
Cadherin related family member 1.
      
 0.620
CLUAP1
Clusterin associated protein 1.
      
 0.618
ENSSARP00000002805
annotation not available
      
 0.570
ENSSARP00000011430
annotation not available
      
 0.531
ENSSARP00000001376
annotation not available
      
 0.526
LRRC18
Leucine rich repeat containing 18.
      
 0.525
ENSSARP00000003467
annotation not available
      
 0.480
ENSSARP00000002031
annotation not available
      
 0.472
KCNJ13
Potassium inwardly rectifying channel subfamily J member 13.
      
 0.472
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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