STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001587annotation not available (250 aa)    
Predicted Functional Partners:
ENSSARP00000003374
annotation not available
    
 
 0.912
ASAH1
N-acylsphingosine amidohydrolase 1.
   
  
 0.785
SPHK2
Sphingosine kinase 2.
    
 0.742
CERS2
Ceramide synthase 2.
    
 
 0.692
CERS4
Ceramide synthase 4.
    
 
 0.692
SLC25A3
Solute carrier family 25 member 3.
   
  
 0.686
ENSSARP00000007327
annotation not available
    
 
 0.682
ENSSARP00000008623
annotation not available
      
 0.665
GSK3B
Glycogen synthase kinase 3 beta.
      
 0.655
SMPD2
Sphingomyelin phosphodiesterase 2.
    
 
 0.639
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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