Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLA2G12BPhospholipase A2 group XIIB. (195 aa)    
Predicted Functional Partners:
TNC
Tenascin C.
    
  0.666
ENSSARP00000008839
annotation not available
     
 0.648
TIMP1
TIMP metallopeptidase inhibitor 1.
    
 0.631
ENSSARP00000005177
annotation not available
     
 0.628
PROCA1
Protein interacting with cyclin A1.
     
 0.628
PLA2G2E
Phospholipase A2 group IIE.
     
 0.523
PIGK
Phosphatidylinositol glycan anchor biosynthesis class K.
      
 0.522
ENSSARP00000003130
annotation not available
     
 0.499
TNFAIP6
TNF alpha induced protein 6.
    
 0.486
ENSSARP00000001719
annotation not available
    
  0.484
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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