STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF114Ring finger protein 114. (181 aa)    
Predicted Functional Partners:
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 0.949
DCAF11
DDB1 and CUL4 associated factor 11.
    
 0.870
RNF4
Ring finger protein 4.
   
 0.826
TNFAIP3
TNF alpha induced protein 3.
    
 
 0.814
UBE2D2
Ubiquitin conjugating enzyme E2 D2.
    
 0.812
ENSSARP00000012368
annotation not available
    
 0.812
ENSSARP00000012932
annotation not available
    
 0.809
TNKS
Tankyrase.
    
  0.808
ENSSARP00000011391
annotation not available
    
   0.795
ENSSARP00000009531
annotation not available
    
 
 0.779
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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