STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF2SH3 domain containing ring finger 2. (718 aa)    
Predicted Functional Partners:
ENSSARP00000007541
annotation not available
    
 
 0.738
TRAPPC12
Trafficking protein particle complex 12.
      
 0.707
ENSSARP00000003915
annotation not available
    
 
 0.675
LDLR
Low density lipoprotein receptor.
    
 0.609
ENSSARP00000003223
annotation not available
      
 0.605
ENSSARP00000006098
annotation not available
   
 
 0.604
SP4
Sp4 transcription factor.
    
 0.596
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.581
ENSSARP00000005872
annotation not available
    
 
 0.570
ENSSARP00000004100
annotation not available
    
  0.567
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.