STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM47RNA binding motif protein 47. (596 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.973
A1CF
APOBEC1 complementation factor.
   
  0.942
ENSSARP00000000030
annotation not available
    
 0.931
ENSSARP00000010805
annotation not available
    
 0.931
RBM46
RNA binding motif protein 46.
   
 
  0.924
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.779
PCBP2
poly(rC) binding protein 2.
   
 0.763
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.763
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
   
 0.753
DHX9
DExH-box helicase 9.
   
 0.750
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.