STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM47RNA binding motif protein 47. (596 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.952
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
   0.855
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.787
MAMSTR
MEF2 activating motif and SAP domain containing transcriptional regulator.
      
 0.742
ENSSARP00000009337
annotation not available
   
 0.725
LIAS
Lipoic acid synthetase.
      
 0.723
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.709
ENSSARP00000007231
annotation not available
   
 0.709
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.706
PCBP2
poly(rC) binding protein 2.
   
 0.693
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.