Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001599annotation not available (112 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.996
UBA7
Ubiquitin like modifier activating enzyme 7.
  
 0.987
ARIH1
Ariadne RBR E3 ubiquitin protein ligase 1.
   
 0.985
UBA1
Ubiquitin like modifier activating enzyme 1.
  
 0.972
ENSSARP00000004100
annotation not available
    
  0.968
ARIH2
Ariadne RBR E3 ubiquitin protein ligase 2.
   
 0.967
ENSSARP00000004519
annotation not available
    
 0.967
UBA6
Ubiquitin like modifier activating enzyme 6.
  
 0.947
ENSSARP00000003469
annotation not available
    
 0.944
ENSSARP00000007617
annotation not available
   
 0.940
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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