Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCKDeoxycytidine kinase. (229 aa)    
Predicted Functional Partners:
CDA
Cytidine deaminase.
    
 0.991
CMPK1
Cytidine/uridine monophosphate kinase 1.
    
 0.959
NT5C2
5'-nucleotidase, cytosolic II.
     
 0.944
AK5
Adenylate kinase 5.
    
 0.933
DCTPP1
dCTP pyrophosphatase 1.
   
 
 0.931
ENSSARP00000009665
annotation not available
    
 0.931
NT5C1A
5'-nucleotidase, cytosolic IA.
     
 0.923
LOC101556441
Cytosolic 5'-nucleotidase 1B.
     
 0.915
AK2
Adenylate kinase 2.
    
 0.903
CCS
Copper chaperone for superoxide dismutase.
     
 0.869
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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