STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001606annotation not available (287 aa)    
Predicted Functional Partners:
ABCG4
ATP binding cassette subfamily G member 4.
   
 0.669
ENSSARP00000010347
annotation not available
    
 0.650
KCNJ8
Potassium inwardly rectifying channel subfamily J member 8.
    
 0.646
KCNJ2
Potassium inwardly rectifying channel subfamily J member 2.
    
 0.640
ENSSARP00000002867
annotation not available
    
 0.640
KCNJ3
Potassium inwardly rectifying channel subfamily J member 3.
    
 0.640
KCNJ6
Potassium inwardly rectifying channel subfamily J member 6.
    
 0.640
DERL1
Derlin 1.
    
 0.639
GOPC
Golgi associated PDZ and coiled-coil motif containing.
    
 0.636
MED6
Mediator complex subunit 6.
    
 0.635
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.