Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001609annotation not available (782 aa)    
Predicted Functional Partners:
TUBB6
Tubulin beta 6 class V.
   
  0.936
GNB2
G protein subunit beta 2.
    
 0.931
GNB4
G protein subunit beta 4.
    
 0.931
ENSSARP00000005587
annotation not available
    
 0.928
GNAQ
G protein subunit alpha q.
    
  0.923
ASIP
Agouti signaling protein.
    
 0.923
GNG3
G protein subunit gamma 3.
   
 0.922
GNGT1
G protein subunit gamma transducin 1.
    
  0.920
GNG11
G protein subunit gamma 11.
    
  0.920
GNG13
G protein subunit gamma 13.
    
  0.920
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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