Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SV2CSynaptic vesicle glycoprotein 2C. (660 aa)    
Predicted Functional Partners:
LAMA2
Laminin subunit alpha 2.
    
 0.906
ENSSARP00000012640
annotation not available
    
 0.605
ENSSARP00000000597
annotation not available
    
 0.593
ENSSARP00000003552
annotation not available
    
 0.579
INTS13
Integrator complex subunit 13.
    
 0.576
SYT1
Synaptotagmin 1.
   
 
 0.576
INTS7
Integrator complex subunit 7.
    
 0.569
INTS10
Integrator complex subunit 10.
    
 0.564
HIBADH
3-hydroxyisobutyrate dehydrogenase.
    
 0.512
GLYR1
Glyoxylate reductase 1 homolog.
    
 0.512
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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