STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001619annotation not available (236 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
   
 0.998
U2SURP
U2 snRNP associated SURP domain containing.
   
 0.998
ENSSARP00000001705
annotation not available
   
 0.994
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.984
SNRPB2
Small nuclear ribonucleoprotein polypeptide B2.
   
 0.974
SF3A3
Splicing factor 3a subunit 3.
   
 0.964
SF3B1
Splicing factor 3b subunit 1.
   
 0.957
SF3A1
Splicing factor 3a subunit 1.
   
 0.955
DDX46
DEAD-box helicase 46.
   
 0.955
SMNDC1
Survival motor neuron domain containing 1.
   
 
  0.953
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.