Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001622annotation not available (183 aa)    
Predicted Functional Partners:
ENSSARP00000009583
annotation not available
   
 0.997
SPCS3
Signal peptidase complex subunit 3.
   
 0.996
IMMP2L
Inner mitochondrial membrane peptidase subunit 2.
     
 0.924
SEC11A
SEC11 homolog A, signal peptidase complex subunit.
     
 0.923
ENSSARP00000007747
annotation not available
     
 0.922
ENSSARP00000009243
annotation not available
    
 0.921
PLAU
Plasminogen activator, urokinase.
     
  0.917
ENSSARP00000001719
annotation not available
   
 
  0.908
F3
Coagulation factor III, tissue factor.
     
  0.908
GRPR
Gastrin releasing peptide receptor.
   
 0.878
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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