Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLP2Proteolipid protein 2. (103 aa)    
Predicted Functional Partners:
PLP1
Proteolipid protein 1.
   
  
 0.869
PDCL2
Phosducin like 2.
      
 0.662
PCBP2
poly(rC) binding protein 2.
      
 0.658
CMTM7
CKLF like MARVEL transmembrane domain containing 7.
      
 0.612
VEZF1
Vascular endothelial zinc finger 1.
      
 0.610
CMTM8
CKLF like MARVEL transmembrane domain containing 8.
      
 0.584
PDCL
Phosducin like.
      
 0.565
ENSSARP00000006904
annotation not available
      
 0.564
SUCLG2
succinate-CoA ligase GDP-forming beta subunit.
      
 0.562
UROD
Uroporphyrinogen decarboxylase.
      
 0.561
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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