Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001626annotation not available (268 aa)    
Predicted Functional Partners:
GJA1
Gap junction protein alpha 1.
    
 0.933
GJD4
Gap junction protein delta 4.
   
 
  0.925
GJB1
Gap junction protein beta 1.
     
  0.921
GJB7
Gap junction protein beta 7.
     
  0.921
GJB2
Gap junction protein beta 2.
     
  0.921
GJB5
Gap junction protein beta 5.
     
  0.921
GJB4
Gap junction protein beta 4.
    
  0.910
ENSSARP00000009035
annotation not available
      
 0.879
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
      
 0.879
CRYBA1
Crystallin beta A1.
  
   
 0.817
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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