ENSSARP00000001628 protein (Sorex araneus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

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[Homology]

Score

ENSSARP00000001628

annotation not available (295 aa)

Predicted Functional Partners:

MRPS22

0.997

MRPS33

0.997

ENSSARP00000009489

0.997

ENSSARP00000012028

0.997

MRPS7

0.996

ENSSARP00000002764

0.996

MRPS12

0.996

ENSSARP00000007439

0.996

MRPS9

0.996

ENSSARP00000004064

0.995

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001628	ENSSARP00000002764	ENSSARP00000001628	ENSSARP00000002764	annotation not available	annotation not available	0.996
ENSSARP00000001628	ENSSARP00000004064	ENSSARP00000001628	ENSSARP00000004064	annotation not available	annotation not available	0.995
ENSSARP00000001628	ENSSARP00000007439	ENSSARP00000001628	ENSSARP00000007439	annotation not available	annotation not available	0.996
ENSSARP00000001628	ENSSARP00000009489	ENSSARP00000001628	ENSSARP00000009489	annotation not available	annotation not available	0.997
ENSSARP00000001628	ENSSARP00000012028	ENSSARP00000001628	ENSSARP00000012028	annotation not available	annotation not available	0.997
ENSSARP00000001628	MRPS12	ENSSARP00000001628	ENSSARP00000006321	annotation not available	28S ribosomal protein S12, mitochondrial.	0.996
ENSSARP00000001628	MRPS22	ENSSARP00000001628	ENSSARP00000002443	annotation not available	Mitochondrial ribosomal protein S22.	0.997
ENSSARP00000001628	MRPS33	ENSSARP00000001628	ENSSARP00000004916	annotation not available	Mitochondrial ribosomal protein S33.	0.997
ENSSARP00000001628	MRPS7	ENSSARP00000001628	ENSSARP00000002694	annotation not available	Mitochondrial ribosomal protein S7.	0.996
ENSSARP00000001628	MRPS9	ENSSARP00000001628	ENSSARP00000010227	annotation not available	Mitochondrial ribosomal protein S9.	0.996
ENSSARP00000002764	ENSSARP00000001628	ENSSARP00000002764	ENSSARP00000001628	annotation not available	annotation not available	0.996
ENSSARP00000002764	ENSSARP00000004064	ENSSARP00000002764	ENSSARP00000004064	annotation not available	annotation not available	0.999
ENSSARP00000002764	ENSSARP00000007439	ENSSARP00000002764	ENSSARP00000007439	annotation not available	annotation not available	0.996
ENSSARP00000002764	ENSSARP00000009489	ENSSARP00000002764	ENSSARP00000009489	annotation not available	annotation not available	0.999
ENSSARP00000002764	ENSSARP00000012028	ENSSARP00000002764	ENSSARP00000012028	annotation not available	annotation not available	0.996
ENSSARP00000002764	MRPS12	ENSSARP00000002764	ENSSARP00000006321	annotation not available	28S ribosomal protein S12, mitochondrial.	0.999
ENSSARP00000002764	MRPS22	ENSSARP00000002764	ENSSARP00000002443	annotation not available	Mitochondrial ribosomal protein S22.	0.996
ENSSARP00000002764	MRPS33	ENSSARP00000002764	ENSSARP00000004916	annotation not available	Mitochondrial ribosomal protein S33.	0.993
ENSSARP00000002764	MRPS7	ENSSARP00000002764	ENSSARP00000002694	annotation not available	Mitochondrial ribosomal protein S7.	0.999
ENSSARP00000002764	MRPS9	ENSSARP00000002764	ENSSARP00000010227	annotation not available	Mitochondrial ribosomal protein S9.	0.999