STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001646annotation not available (315 aa)    
Predicted Functional Partners:
KSR1
Kinase suppressor of ras 1.
    
 0.946
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
    
   0.762
ENSSARP00000004100
annotation not available
    
  0.753
BRCA1
BRCA1 DNA repair associated.
    
 
 0.753
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.686
OASL
2'-5'-oligoadenylate synthetase like.
    
  0.679
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.679
HMG20A
High mobility group 20A.
    
   0.630
ENSSARP00000002049
annotation not available
      
 0.628
CSDE1
Cold shock domain containing E1.
    
 0.627
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.