Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC19Leucine rich repeat containing 19. (368 aa)    
Predicted Functional Partners:
KBTBD8
Kelch repeat and BTB domain containing 8.
    
 0.761
ENSSARP00000007321
annotation not available
    
 
 0.710
ARMCX3
Armadillo repeat containing X-linked 3.
    
 0.702
KBTBD6
Kelch repeat and BTB domain containing 6.
    
 0.694
TRMT11
tRNA methyltransferase 11 homolog.
      
 0.680
ARMC10
Armadillo repeat containing 10.
    
 0.633
IMMP2L
Inner mitochondrial membrane peptidase subunit 2.
      
 0.595
ENSSARP00000002048
annotation not available
    
 0.579
F2RL1
F2R like trypsin receptor 1.
    
 
 0.524
CASK
Calcium/calmodulin dependent serine protein kinase.
    
  0.482
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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