Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4CCharged multivesicular body protein 4C. (233 aa)    
Predicted Functional Partners:
CHMP2A
Charged multivesicular body protein 2A.
   
 0.999
CHMP7
Charged multivesicular body protein 7.
    
0.999
CHMP5
Charged multivesicular body protein 5.
  
0.997
VPS4B
Vacuolar protein sorting 4 homolog B.
   
 0.995
ENSSARP00000008064
annotation not available
   
 0.994
ENSSARP00000000655
annotation not available
   
 0.993
VPS25
Vacuolar protein sorting 25 homolog.
    
 0.992
CHMP4B
Charged multivesicular body protein 4B.
  
  
 
0.991
SNF8
SNF8 subunit of ESCRT-II.
    
 0.991
ENSSARP00000012128
annotation not available
    
 0.991
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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