STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DKC1Dyskerin pseudouridine synthase 1. (501 aa)    
Predicted Functional Partners:
ENSSARP00000006007
annotation not available
   
 0.999
FBL
Fibrillarin.
   
 0.999
ENSSARP00000009048
annotation not available
   
 0.999
NOP58
NOP58 ribonucleoprotein.
  
 0.999
ENSSARP00000004953
annotation not available
   
 0.998
WRAP53
WD repeat containing antisense to TP53.
    
 0.998
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
 0.998
ENSSARP00000012310
annotation not available
   
 0.998
SNU13
Small nuclear ribonucleoprotein 13.
  
 0.995
NAT10
N-acetyltransferase 10.
   
 0.994
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.