Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DKC1Dyskerin pseudouridine synthase 1. (501 aa)    
Predicted Functional Partners:
FBL
Fibrillarin.
   
 0.999
ENSSARP00000009048
annotation not available
   
 0.999
NOP58
NOP58 ribonucleoprotein.
  
 0.999
NAT10
N-acetyltransferase 10.
   
 0.999
NOLC1
Nucleolar and coiled-body phosphoprotein 1.
   
 0.998
WRAP53
WD repeat containing antisense to TP53.
    
 0.998
ENSSARP00000006007
annotation not available
   
 0.998
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
 0.998
GNL3L
G protein nucleolar 3 like.
  
 0.997
ENSSARP00000004953
annotation not available
   
 0.997
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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