STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH18Cadherin 18. (771 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.949
CTNND1
Catenin delta 1.
   
 0.945
JUP
Junction plakoglobin.
    
 0.942
ENSSARP00000004017
annotation not available
   
 0.937
ENSSARP00000010294
annotation not available
   
 0.936
CDH6
Cadherin 6.
   
 0.936
FAT3
FAT atypical cadherin 3.
    
  0.931
CDH17
Cadherin 17.
     
 0.924
CDH7
Cadherin 7.
   
 
  0.923
FAT1
FAT atypical cadherin 1.
    
  0.923
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.