STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH18Cadherin 18. (771 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.895
JUP
Junction plakoglobin.
    
 0.865
ENSSARP00000010294
annotation not available
  
0.822
CDH6
Cadherin 6.
   
0.820
CTNNA3
Catenin alpha 3.
    
 0.808
CDH7
Cadherin 7.
   
 
0.804
CDH11
Cadherin 11.
  
 
0.800
ENSSARP00000004017
annotation not available
   
0.799
ENSSARP00000011359
annotation not available
     
0.799
CDH20
Cadherin 20.
     
0.798
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.