Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001672annotation not available (2031 aa)    
Predicted Functional Partners:
COPS5
COP9 signalosome subunit 5.
    
  0.918
LRCH1
Leucine rich repeats and calponin homology domain containing 1.
    
 
 0.903
GRB2
Growth factor receptor bound protein 2.
    
 0.902
LRCH3
Leucine rich repeats and calponin homology domain containing 3.
    
 
 0.901
PLCG1
Phospholipase C gamma 1.
   
  0.898
COPS2
COP9 signalosome subunit 2.
    
  0.894
COPS3
COP9 signalosome subunit 3.
    
  0.893
WDR6
WD repeat domain 6.
    
  0.883
DCAF1
DDB1 and CUL4 associated factor 1.
    
  0.882
DOCK8
Dedicator of cytokinesis 8.
    
   0.878
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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