Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OMDOsteomodulin. (416 aa)    
Predicted Functional Partners:
OGN
Osteoglycin.
   
 
 0.843
ENSSARP00000002302
annotation not available
    
 0.707
KERA
Keratocan.
   
 
  0.627
AHSG
Alpha 2-HS glycoprotein.
    
 0.622
FGG
Fibrinogen gamma chain.
    
 
 0.612
CSGALNACT2
Chondroitin sulfate N-acetylgalactosaminyltransferase 2.
    
 0.612
TNFRSF19
TNF receptor superfamily member 19.
    
 
 0.597
AMBN
Ameloblastin.
    
 
 0.585
GPC3
Glypican 3.
    
 0.565
BDNF
Brain derived neurotrophic factor.
      
 0.562
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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