ENSSARP00000001677 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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Textmining

[Homology]

Score

ENSSARP00000001677

annotation not available (375 aa)

Predicted Functional Partners:

ENSSARP00000004514

0.785

ENSSARP00000013002

0.729

ENSSARP00000001344

0.726

ENSSARP00000002102

0.690

SLC46A2

0.671

SLC46A1

0.665

ADGRL4

0.626

ENSSARP00000013078

0.621

SGPL1

0.593

ENSSARP00000001520

0.590

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADGRL4	ENSSARP00000001677	ENSSARP00000002672	ENSSARP00000001677	Adhesion G protein-coupled receptor L4.	annotation not available	0.626
ADGRL4	ENSSARP00000004514	ENSSARP00000002672	ENSSARP00000004514	Adhesion G protein-coupled receptor L4.	annotation not available	0.796
ENSSARP00000001344	ENSSARP00000001677	ENSSARP00000001344	ENSSARP00000001677	annotation not available	annotation not available	0.726
ENSSARP00000001344	ENSSARP00000002102	ENSSARP00000001344	ENSSARP00000002102	annotation not available	annotation not available	0.637
ENSSARP00000001344	ENSSARP00000013002	ENSSARP00000001344	ENSSARP00000013002	annotation not available	annotation not available	0.668
ENSSARP00000001344	SLC46A1	ENSSARP00000001344	ENSSARP00000001755	annotation not available	Solute carrier family 46 member 1.	0.661
ENSSARP00000001344	SLC46A2	ENSSARP00000001344	ENSSARP00000006974	annotation not available	Solute carrier family 46 member 2.	0.712
ENSSARP00000001520	ENSSARP00000001677	ENSSARP00000001520	ENSSARP00000001677	annotation not available	annotation not available	0.590
ENSSARP00000001677	ADGRL4	ENSSARP00000001677	ENSSARP00000002672	annotation not available	Adhesion G protein-coupled receptor L4.	0.626
ENSSARP00000001677	ENSSARP00000001344	ENSSARP00000001677	ENSSARP00000001344	annotation not available	annotation not available	0.726
ENSSARP00000001677	ENSSARP00000001520	ENSSARP00000001677	ENSSARP00000001520	annotation not available	annotation not available	0.590
ENSSARP00000001677	ENSSARP00000002102	ENSSARP00000001677	ENSSARP00000002102	annotation not available	annotation not available	0.690
ENSSARP00000001677	ENSSARP00000004514	ENSSARP00000001677	ENSSARP00000004514	annotation not available	annotation not available	0.785
ENSSARP00000001677	ENSSARP00000013002	ENSSARP00000001677	ENSSARP00000013002	annotation not available	annotation not available	0.729
ENSSARP00000001677	ENSSARP00000013078	ENSSARP00000001677	ENSSARP00000013078	annotation not available	annotation not available	0.621
ENSSARP00000001677	SGPL1	ENSSARP00000001677	ENSSARP00000009680	annotation not available	Sphingosine-1-phosphate lyase 1.	0.593
ENSSARP00000001677	SLC46A1	ENSSARP00000001677	ENSSARP00000001755	annotation not available	Solute carrier family 46 member 1.	0.665
ENSSARP00000001677	SLC46A2	ENSSARP00000001677	ENSSARP00000006974	annotation not available	Solute carrier family 46 member 2.	0.671
ENSSARP00000002102	ENSSARP00000001344	ENSSARP00000002102	ENSSARP00000001344	annotation not available	annotation not available	0.637
ENSSARP00000002102	ENSSARP00000001677	ENSSARP00000002102	ENSSARP00000001677	annotation not available	annotation not available	0.690