ENSSARP00000001680 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSARP00000001680

annotation not available (67 aa)

Predicted Functional Partners:

ENSSARP00000007111

0.954

ENSSARP00000005094

0.616

ENSSARP00000006653

0.612

ENSSARP00000002505

0.567

ENSSARP00000006127

0.567

ACP5

0.563

RNF38

0.556

RNF44

0.556

CRLS1

0.454

SLC12A1

0.449

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACP5	ENSSARP00000001680	ENSSARP00000006260	ENSSARP00000001680	Acid phosphatase 5, tartrate resistant.	annotation not available	0.563
CRLS1	ENSSARP00000001680	ENSSARP00000005036	ENSSARP00000001680	Cardiolipin synthase 1.	annotation not available	0.454
ENSSARP00000001680	ACP5	ENSSARP00000001680	ENSSARP00000006260	annotation not available	Acid phosphatase 5, tartrate resistant.	0.563
ENSSARP00000001680	CRLS1	ENSSARP00000001680	ENSSARP00000005036	annotation not available	Cardiolipin synthase 1.	0.454
ENSSARP00000001680	ENSSARP00000002505	ENSSARP00000001680	ENSSARP00000002505	annotation not available	annotation not available	0.567
ENSSARP00000001680	ENSSARP00000005094	ENSSARP00000001680	ENSSARP00000005094	annotation not available	annotation not available	0.616
ENSSARP00000001680	ENSSARP00000006127	ENSSARP00000001680	ENSSARP00000006127	annotation not available	annotation not available	0.567
ENSSARP00000001680	ENSSARP00000006653	ENSSARP00000001680	ENSSARP00000006653	annotation not available	annotation not available	0.612
ENSSARP00000001680	ENSSARP00000007111	ENSSARP00000001680	ENSSARP00000007111	annotation not available	annotation not available	0.954
ENSSARP00000001680	RNF38	ENSSARP00000001680	ENSSARP00000009132	annotation not available	Ring finger protein 38.	0.556
ENSSARP00000001680	RNF44	ENSSARP00000001680	ENSSARP00000012070	annotation not available	Ring finger protein 44.	0.556
ENSSARP00000001680	SLC12A1	ENSSARP00000001680	ENSSARP00000003042	annotation not available	Solute carrier family 12 member 1.	0.449
ENSSARP00000002505	ENSSARP00000001680	ENSSARP00000002505	ENSSARP00000001680	annotation not available	annotation not available	0.567
ENSSARP00000005094	ENSSARP00000001680	ENSSARP00000005094	ENSSARP00000001680	annotation not available	annotation not available	0.616
ENSSARP00000006127	ENSSARP00000001680	ENSSARP00000006127	ENSSARP00000001680	annotation not available	annotation not available	0.567
ENSSARP00000006653	ENSSARP00000001680	ENSSARP00000006653	ENSSARP00000001680	annotation not available	annotation not available	0.612
ENSSARP00000007111	ENSSARP00000001680	ENSSARP00000007111	ENSSARP00000001680	annotation not available	annotation not available	0.954
RNF38	ENSSARP00000001680	ENSSARP00000009132	ENSSARP00000001680	Ring finger protein 38.	annotation not available	0.556
RNF44	ENSSARP00000001680	ENSSARP00000012070	ENSSARP00000001680	Ring finger protein 44.	annotation not available	0.556
SLC12A1	ENSSARP00000001680	ENSSARP00000003042	ENSSARP00000001680	Solute carrier family 12 member 1.	annotation not available	0.449