Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001691annotation not available (260 aa)    
Predicted Functional Partners:
UPK2
Uroplakin 2.
   
 
 0.974
ENSSARP00000012931
annotation not available
   
  
 0.712
GPM6A
Glycoprotein M6A.
   
 0.691
ENSSARP00000005409
annotation not available
     
 0.612
ENSSARP00000001822
annotation not available
      
 0.592
PLA1A
Phospholipase A1 member A.
      
 0.560
PDLIM4
PDZ and LIM domain 4.
      
 0.557
CD53
CD53 molecule.
      
 0.496
ENSSARP00000006594
annotation not available
      
 0.472
ENSSARP00000002977
annotation not available
      
 0.452
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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