STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001709annotation not available (250 aa)    
Predicted Functional Partners:
EFL1
Elongation factor like GTPase 1.
  
 
 0.973
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 
 0.947
ENSSARP00000002718
annotation not available
  
   0.909
RPL11
Ribosomal protein L11.
   
 
 0.817
EEF2
Eukaryotic translation elongation factor 2.
  
 
 0.816
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
  
 
 0.803
RPL24
Ribosomal protein L24.
  
 
 0.746
ENSSARP00000001020
annotation not available
   
 
 0.735
RPS23
Ribosomal protein S23.
  
 
 0.728
MRPS15
Mitochondrial ribosomal protein S15.
   
   0.726
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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