STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCHL5Ubiquitin C-terminal hydrolase L5. (364 aa)    
Predicted Functional Partners:
ACTR8
Actin related protein 8.
    
 0.999
BRD8
Bromodomain containing 8.
    
  0.999
USP14
Ubiquitin specific peptidase 14.
    
 
 0.999
INO80
INO80 complex ATPase subunit.
    
 0.999
RUVBL2
RuvB like AAA ATPase 2.
   
 0.999
INO80E
INO80 complex subunit E.
    
  0.996
ACTR5
Actin related protein 5.
    
 0.981
ENSSARP00000008544
annotation not available
    
 0.979
ENSSARP00000010979
annotation not available
   
 0.977
PSMB2
Proteasome 20S subunit beta 2.
   
 0.976
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.