Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM171BFamily with sequence similarity 171 member B. (785 aa)    
Predicted Functional Partners:
ENSSARP00000000283
annotation not available
   
  
 0.683
ANAPC5
Anaphase promoting complex subunit 5.
      
 0.671
F13B
Coagulation factor XIII B chain.
      
 0.646
CAMLG
Calcium modulating ligand.
      
 0.619
RND1
Rho family GTPase 1.
      
 0.616
ARL3
ADP ribosylation factor like GTPase 3.
      
 0.592
MGST1
Microsomal glutathione S-transferase 1.
      
 0.585
ENSSARP00000009403
annotation not available
   
  
 0.569
ENSSARP00000006519
annotation not available
      
 0.557
ENSSARP00000011050
annotation not available
      
 0.549
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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