GPR85 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

GPR85

G protein-coupled receptor 85. (370 aa)

Predicted Functional Partners:

GPR45

0.577

GPR160

0.563

GPR176

0.558

SMIM20

0.498

ENSSARP00000004647

0.484

ENSSARP00000006394

0.484

SHQ1

0.482

ENSSARP00000005770

0.460

ENSSARP00000010132

0.457

SLC35G2

0.445

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000004647	GPR176	ENSSARP00000004647	ENSSARP00000010263	annotation not available	G protein-coupled receptor 176.	0.401
ENSSARP00000004647	GPR85	ENSSARP00000004647	ENSSARP00000001718	annotation not available	G protein-coupled receptor 85.	0.484
ENSSARP00000005770	GPR176	ENSSARP00000005770	ENSSARP00000010263	annotation not available	G protein-coupled receptor 176.	0.447
ENSSARP00000005770	GPR45	ENSSARP00000005770	ENSSARP00000008181	annotation not available	G protein-coupled receptor 45.	0.550
ENSSARP00000005770	GPR85	ENSSARP00000005770	ENSSARP00000001718	annotation not available	G protein-coupled receptor 85.	0.460
ENSSARP00000006394	GPR176	ENSSARP00000006394	ENSSARP00000010263	annotation not available	G protein-coupled receptor 176.	0.438
ENSSARP00000006394	GPR85	ENSSARP00000006394	ENSSARP00000001718	annotation not available	G protein-coupled receptor 85.	0.484
ENSSARP00000010132	GPR85	ENSSARP00000010132	ENSSARP00000001718	annotation not available	G protein-coupled receptor 85.	0.457
ENSSARP00000010132	SLC35G2	ENSSARP00000010132	ENSSARP00000009249	annotation not available	Solute carrier family 35 member G2.	0.650
GPR160	GPR85	ENSSARP00000007281	ENSSARP00000001718	G protein-coupled receptor 160.	G protein-coupled receptor 85.	0.563
GPR176	ENSSARP00000004647	ENSSARP00000010263	ENSSARP00000004647	G protein-coupled receptor 176.	annotation not available	0.401
GPR176	ENSSARP00000005770	ENSSARP00000010263	ENSSARP00000005770	G protein-coupled receptor 176.	annotation not available	0.447
GPR176	ENSSARP00000006394	ENSSARP00000010263	ENSSARP00000006394	G protein-coupled receptor 176.	annotation not available	0.438
GPR176	GPR45	ENSSARP00000010263	ENSSARP00000008181	G protein-coupled receptor 176.	G protein-coupled receptor 45.	0.679
GPR176	GPR85	ENSSARP00000010263	ENSSARP00000001718	G protein-coupled receptor 176.	G protein-coupled receptor 85.	0.558
GPR45	ENSSARP00000005770	ENSSARP00000008181	ENSSARP00000005770	G protein-coupled receptor 45.	annotation not available	0.550
GPR45	GPR176	ENSSARP00000008181	ENSSARP00000010263	G protein-coupled receptor 45.	G protein-coupled receptor 176.	0.679
GPR45	GPR85	ENSSARP00000008181	ENSSARP00000001718	G protein-coupled receptor 45.	G protein-coupled receptor 85.	0.577
GPR85	ENSSARP00000004647	ENSSARP00000001718	ENSSARP00000004647	G protein-coupled receptor 85.	annotation not available	0.484
GPR85	ENSSARP00000005770	ENSSARP00000001718	ENSSARP00000005770	G protein-coupled receptor 85.	annotation not available	0.460