Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GNRH2Gonadotropin releasing hormone 2. (104 aa)    
Predicted Functional Partners:
GNRH1
Gonadotropin releasing hormone 1.
     
 0.878
MRPS22
Mitochondrial ribosomal protein S22.
   
 0.873
ENSSARP00000001628
annotation not available
   
 0.856
MRPS28
Mitochondrial ribosomal protein S28.
   
 0.856
ENSSARP00000013024
annotation not available
   
 0.856
MRPS9
Mitochondrial ribosomal protein S9.
   
 0.849
DAP3
Death associated protein 3.
   
  0.846
ENSSARP00000010919
annotation not available
   
  0.836
MRPS27
Mitochondrial ribosomal protein S27.
   
 0.835
MRPS31
Mitochondrial ribosomal protein S31.
   
  0.834
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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